PubMed Publications

Recent INBRE Publications

1. Identification of driver modules in pan-cancer via coordinating coverage and exclusivity. Gao B, Li G, Liu J, Li Y, Huang X., Oncotarget. 2017 May 30;8(22):36115-36126. doi: 10.18632/oncotarget.16433. PMID: 28415609

2. Indicators of responsiveness to immune checkpoint inhibitors. Shields BD, Mahmoud F, Taylor EM, Byrum SD, Sengupta D, Koss B, Baldini G, Ransom S, Cline K, Mackintosh SG, Edmondson RD, Shalin S, Tackett AJ., Sci Rep. 2017 Apr 11;7(1):807. doi: 10.1038/s41598-017-01000-2., PMID: 28400597

3. Time- and radiation-dose dependent changes in the plasma proteome after total body irradiation of non-human primates: Implications for biomarker selection. Byrum SD, Burdine MS, Orr L, Mackintosh SG, Authier S, Pouliot M, Hauer-Jensen M, Tackett AJ., PLoS One. 2017 Mar 28;12(3):e0174771. doi: 10.1371/journal.pone.0174771. eCollection 2017. PMID: 28350824

4. Generative Anatomy Modeling Language (GAML). Demirel D, Yu A, Baer-Cooper S, Halic T, Bayrak C., Int J Med Robot. 2017 Mar 5. doi: 10.1002/rcs.1813. [Epub ahead of print], PMID: 28260232

5. KDM5 lysine demethylases are involved in maintenance of 3’UTR length. Blair LP, Liu Z, Labitigan RL, Wu L, Zheng D, Xia Z, Pearson EL, Nazeer FI, Cao J, Lang SM, Rines RJ, Mackintosh SG, Moore CL, Li W, Tian B, Tackett AJ, Yan Q., Sci Adv. 2016 Nov 18;2(11):e1501662. doi: 10.1126/sciadv.1501662. eCollection 2016 Nov., PMID: 28138513

6. Using three-point bending to evaluate tibia bone strength in ovariectomized young mice. Deckard C, Walker A, Hill BJ., J Biol Phys. 2017 Mar;43(1):139-148. doi: 10.1007/s10867-016-9439-y. Epub 2017 Jan 28. PMID: 28132161

7. GSAR: Bioconductor package for Gene Set analysis in R. Rahmatallah Y, Zybailov B, Emmert-Streib F, Glazko G., BMC Bioinformatics. 2017 Jan 24;18(1):61. doi: 10.1186/s12859-017-1482-6. PMID: 28118818

8. 1,3-Butadiene-induced mitochondrial dysfunction is correlated with mitochondrial CYP2E1 activity in Collaborative Cross mice. Hartman JH, Miller GP, Caro AA, Byrum SD, Orr LM, Mackintosh SG, Tackett AJ, MacMillan-Crow LA, Hallberg LM, Ameredes BT, Boysen G., Toxicology. 2017 Mar 1;378:114-124. doi: 10.1016/j.tox.2017.01.005. Epub 2017 Jan 9. PMID: 28082109

9. Influence of glutamic acid residues and pH on the properties of transmembrane helices. Rajagopalan V, Greathouse DV, Koeppe RE 2nd., Biochim Biophys Acta. 2017 Mar;1859(3):484-492. doi: 10.1016/j.bbamem.2017.01.006. Epub 2017 Jan 7. PMID: 28069412

10. Synthesis and antimicrobial studies of novel derivatives of 4-(4-formyl-3-phenyl-1H-pyrazol-1-yl)benzoic acid as potent anti-Acinetobacter baumannii agents. Allison D, Delancey E, Ramey H, Williams C, Alsharif ZA, Al-Khattabi H, Ontko A, Gilmore D, Alam MA., Bioorg Med Chem Lett. 2017 Feb 1;27(3):387-392. doi: 10.1016/j.bmcl.2016.12.068. Epub 2016 Dec 29. PMID: 28065568

Link to all AR INBRE PubMed publications

Updated 8/14/2017